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VNG_RS05700 bacterio-opsin activator [ Halobacterium salinarum NRC-1 ]

Gene ID: 1448068, updated on 30-Jan-2018

Summary

Gene symbol
VNG_RS05700
Gene description
bacterio-opsin activator
Locus tag
VNG_RS05700
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922, old-name: Halobacterium sp. NRC-1)
Lineage
Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG1464G

Genomic context

Sequence:
NC_002607.1 (1085495..1087519, complement)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ATPase AAA Neighboring gene SRPBCC family protein Neighboring gene beta-carotene 15,15'-dioxygenase Neighboring gene transcriptional regulator Neighboring gene rhodopsin

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
bacterio-opsin activator
WP_010903066.1
  • Bap; involved in the expression of bop and brp genes

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    1085495..1087519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010903066.1 Peptide Sequence

    See identical proteins and their annotated locations for WP_010903066.1

    UniProtKB/Swiss-Prot
    Q9HPU8
    UniProtKB/TrEMBL
    B0R5N6
    Conserved Domains (7) summary
    smart00086
    Location:233275
    PAC; Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
    PRK13558
    Location:11674
    PRK13558; bacterio-opsin activator; Provisional
    cd00130
    Location:167272
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam04967
    Location:617669
    HTH_10; HTH DNA binding domain
    pfam13185
    Location:310445
    GAF_2; GAF domain
    pfam15915
    Location:456611
    BAT; GAF and HTH_10 associated domain
    cl19078
    Location:38114
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
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