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VNG_RS01005 helix-turn-helix domain-containing protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1447153, updated on 30-Jan-2018

Summary

Gene symbol
VNG_RS01005
Gene description
helix-turn-helix domain-containing protein
Locus tag
VNG_RS01005
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922, old-name: Halobacterium sp. NRC-1)
Lineage
Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG0247C

Genomic context

Sequence:
NC_002607.1 (201609..202517)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene tRNA pseudouridine(13) synthase TruD Neighboring gene peptidyl-tRNA hydrolase Neighboring gene hypothetical protein Neighboring gene deoxycytidine triphosphate deaminase Neighboring gene hypothetical protein Neighboring gene DUF5059 domain-containing protein Neighboring gene phosphopantothenate/pantothenate synthetase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
helix-turn-helix domain-containing protein

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    201609..202517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010902138.1 Peptide Sequence

    See identical proteins and their annotated locations for WP_010902138.1

    UniProtKB/TrEMBL
    B0R2Y8, Q9HSG2
    Conserved Domains (3) summary
    COG1396
    Location:24118
    HipB; Transcriptional regulator, contains XRE-family HTH domain [Transcription]
    COG1992
    Location:134302
    COG1992; Predicted transcriptional regulator fused phosphomethylpyrimidine kinase (thiamin biosynthesis) [General function prediction only]
    COG2522
    Location:7131
    COG2522; Predicted transcriptional regulator [General function prediction only]
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