Format

Send to:

Choose Destination

VNG_RS00925 PDZ domain-containing protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1447140, updated on 30-Jan-2018

Summary

Gene symbol
VNG_RS00925
Gene description
PDZ domain-containing protein
Locus tag
VNG_RS00925
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922, old-name: Halobacterium sp. NRC-1)
Lineage
Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG0226G

Genomic context

Sequence:
NC_002607.1 (191310..192380)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ATPase AAA Neighboring gene tRNA Neighboring gene DUF192 domain-containing protein Neighboring gene GMP synthase Neighboring gene DUF2070 domain-containing protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    191310..192380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010902123.1 Peptide Sequence

    See identical proteins and their annotated locations for WP_010902123.1

    UniProtKB/TrEMBL
    B0R2X2, Q9HSH6
    Conserved Domains (2) summary
    cd00987
    Location:244348
    PDZ_serine_protease; PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind ...
    pfam13365
    Location:74210
    Trypsin_2; Trypsin-like peptidase domain
Support Center