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VNG_RS00660 PAS domain S-box protein [ Halobacterium salinarum NRC-1 ]

Gene ID: 1447087, updated on 30-Jan-2018

Summary

Gene symbol
VNG_RS00660
Gene description
PAS domain S-box protein
Locus tag
VNG_RS00660
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922, old-name: Halobacterium sp. NRC-1)
Lineage
Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG0160G

Genomic context

Sequence:
NC_002607.1 (132683..135277)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene MFS transporter Neighboring gene sugar kinase Neighboring gene DNA mismatch repair protein MutL Neighboring gene glutamate dehydrogenase Neighboring gene acyl-CoA synthetase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    132683..135277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010902073.1 Peptide Sequence

    See identical proteins and their annotated locations for WP_010902073.1

    UniProtKB/TrEMBL
    Q9HSM5
    Conserved Domains (8) summary
    smart00091
    Location:185235
    PAS; PAS domain
    COG3413
    Location:642859
    COG3413; Predicted DNA binding protein, contains HTH domain [General function prediction only]
    TIGR00229
    Location:183299
    sensory_box; PAS domain S-box
    pfam04967
    Location:800852
    HTH_10; HTH DNA binding domain
    pfam13185
    Location:489633
    GAF_2; GAF domain
    pfam13863
    Location:451505
    DUF4200; Domain of unknown function (DUF4200)
    pfam15915
    Location:645796
    BAT; GAF and HTH_10 associated domain
    cl00514
    Location:281432
    Nitro_FMN_reductase; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are ...
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