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Rabac1 Rab acceptor 1 (prenylated) [ Mus musculus (house mouse) ]

Gene ID: 14470, updated on 30-Apr-2024

Summary

Official Symbol
Rabac1provided by MGI
Official Full Name
Rab acceptor 1 (prenylated)provided by MGI
Primary source
MGI:MGI:1201692
See related
Ensembl:ENSMUSG00000003380 AllianceGenome:MGI:1201692
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PRA1; Gbpap1; prenylin; 2310040I06Rik
Summary
Predicted to enable identical protein binding activity; proline-rich region binding activity; and protein C-terminus binding activity. Located in Golgi apparatus. Is integral component of membrane. Is expressed in several structures, including alimentary system; genitourinary system; hemolymphoid system gland; integumental system; and nervous system. Orthologous to human RABAC1 (Rab acceptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in lung adult (RPKM 327.7), adrenal adult (RPKM 305.5) and 28 other tissues See more
Orthologs
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Genomic context

See Rabac1 in Genome Data Viewer
Location:
7 A3; 7 13.73 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (24669175..24672153, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (24969750..24972728, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ETS repressor factor like Neighboring gene STARR-positive B cell enhancer ABC_E4904 Neighboring gene predicted gene, 36809 Neighboring gene STARR-positive B cell enhancer ABC_E4905 Neighboring gene microRNA 7046 Neighboring gene ATPase, Na+/K+ transporting, alpha 3 polypeptide Neighboring gene microRNA 7047 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:25785259-25785485 Neighboring gene glutamate receptor, ionotropic, kainate 5 (gamma 2) Neighboring gene zinc finger protein 574

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTPase binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables proline-rich region binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in synapse ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
prenylated Rab acceptor protein 1
Names
GTP binding protein associated protein 1
PRA1 family protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010261.2NP_034391.1  prenylated Rab acceptor protein 1

    See identical proteins and their annotated locations for NP_034391.1

    Status: VALIDATED

    Source sequence(s)
    AK150681, BB356182, BY127932
    Consensus CDS
    CCDS20968.1
    UniProtKB/Swiss-Prot
    Q3TDB4, Q9Z0S9
    Related
    ENSMUSP00000076227.8, ENSMUST00000076961.9
    Conserved Domains (1) summary
    pfam03208
    Location:40170
    PRA1; PRA1 family protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    24669175..24672153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)