Format

Send to:

Choose Destination

SOCS2-AS1 SOCS2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 144481, updated on 25-Jan-2022

Summary

Official Symbol
SOCS2-AS1provided by HGNC
Official Full Name
SOCS2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27054
See related
Ensembl:ENSG00000246985 MIM:617269; AllianceGenome:HGNC:27054
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in prostate (RPKM 8.6), endometrium (RPKM 4.1) and 15 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SOCS2-AS1 in Genome Data Viewer
Location:
12q22
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (93565628..93571398, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (93959404..93965174, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112267866 Neighboring gene ubiquitin conjugating enzyme E2 N Neighboring gene mitochondrial ribosomal protein L42 Neighboring gene RNA, 7SL, cytoplasmic 737, pseudogene Neighboring gene suppressor of cytokine signaling 2 Neighboring gene phosphoglycerate mutase 1 (brain) pseudogene Neighboring gene CASP2 and RIPK1 domain containing adaptor with death domain Neighboring gene CRADD antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038263.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC012085
    Related
    ENST00000551626.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    93565628..93571398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center