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S spike protein [ Middle East respiratory syndrome-related coronavirus ]

Gene ID: 14254594, updated on 14-Aug-2021

Summary

Gene symbol
S
Gene description
spike protein
Locus tag
G128_gp02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Middle East respiratory syndrome-related coronavirus (strain: HCoV-EMC, isolate: HCoV-EMC/2012, nat-host: Homo sapiens)
Lineage
Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus
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Genomic context

Sequence:
NC_019843.3 (21456..25517)

NC_019843.3Genomic Context describing neighboring genes Neighboring gene 1A polyprotein;1AB polyprotein Neighboring gene NS3 protein Neighboring gene NS4A protein Neighboring gene NS4B protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
spike protein
Names
surface glycoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019843.3 Reference assembly

    Range
    21456..25517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009047204.1 spike protein [Middle East respiratory syndrome-related coronavirus]

    See identical proteins and their annotated locations for YP_009047204.1

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd21486
    Location:368586
    human_MERS-CoV_Spike_S1_RBD; receptor-binding domain of the S1 subunit of the Spike (S) protein from human Middle East respiratory syndrome coronavirus
    cd21626
    Location:24350
    MERS-CoV-like_Spike_S1_NTD; N-terminal domain of the S1 subunit of the Spike (S) protein from Middle East respiratory syndrome-related coronavirus and related betacoronaviruses in the C lineage
    cd22379
    Location:6081294
    MERS-CoV-like_Spike_SD1-2_S1-S2_S2; SD-1 and SD-2 subdomains, the S1/S2 cleavage region, and the S2 fusion subunit of the spike (S) glycoprotein from Middle East respiratory syndrome coronavirus and related betacoronaviruses in the C lineage
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