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Fjx1 four jointed box 1 [ Mus musculus (house mouse) ]

Gene ID: 14221, updated on 26-Sep-2022

Summary

Official Symbol
Fjx1provided by MGI
Official Full Name
four jointed box 1provided by MGI
Primary source
MGI:MGI:1341907
See related
Ensembl:ENSMUSG00000075012 AllianceGenome:MGI:1341907
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Acts upstream of or within retina layer formation. Located in extracellular space. Is expressed in several structures, including alimentary system; central nervous system; embryo ectoderm; eye; and genitourinary system. Orthologous to human FJX1 (four-jointed box kinase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Fjx1 in Genome Data Viewer
Location:
2; 2 E2
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (102279711..102282137, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (102449366..102451792, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing 44 Neighboring gene predicted gene, 52521 Neighboring gene predicted gene, 39890 Neighboring gene peptidase domain containing associated with muscle regeneration 1 Neighboring gene uncharacterized LOC115489466 Neighboring gene solute carrier family 1 (glial high affinity glutamate transporter), member 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (3) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in cell-cell signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within retina layer formation IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
four-jointed box protein 1
Names
four-jointed protein homolog
four-jointed protein x1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010218.2NP_034348.2  four-jointed box protein 1 precursor

    See identical proteins and their annotated locations for NP_034348.2

    Status: PROVISIONAL

    Source sequence(s)
    BC051990
    Consensus CDS
    CCDS16467.1
    UniProtKB/Swiss-Prot
    Q8BQB4, Q9Z1M1
    Related
    ENSMUSP00000097270.4, ENSMUST00000099678.5
    Conserved Domains (1) summary
    cd10468
    Location:146430
    Four-jointed-like_C; C-terminal kinase domain of Drosophila Four-jointed (Fj), mouse Fjx1, and related proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    102279711..102282137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)