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SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 [ Homo sapiens (human) ]

Gene ID: 140771, updated on 13-May-2022

Summary

Official Symbol
SMCR5provided by HGNC
Official Full Name
Smith-Magenis syndrome chromosome region, candidate 5provided by HGNC
Primary source
HGNC:HGNC:17918
See related
Ensembl:ENSG00000226746 AllianceGenome:HGNC:17918
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00034
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Genomic context

See SMCR5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (17776686..17779529, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (17723281..17726123, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (17680000..17682843, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene retinoic acid induced 1 Neighboring gene uncharacterized LOC124903943 Neighboring gene Sharpr-MPRA regulatory region 10129 Neighboring gene RAI1 antisense RNA 1 Neighboring gene uncharacterized LOC124903942 Neighboring gene Sharpr-MPRA regulatory region 10806 Neighboring gene Sharpr-MPRA regulatory region 10333

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024007.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC122129
    Related
    ENST00000543475.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    17776686..17779529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    17723281..17726123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_144774.1: Suppressed sequence

    Description
    NM_144774.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.