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cyp1a cytochrome P450, family 1, subfamily A [ Danio rerio (zebrafish) ]

Gene ID: 140634, updated on 19-Sep-2021

Summary

Official Symbol
cyp1aprovided by ZNC
Official Full Name
cytochrome P450, family 1, subfamily Aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-011219-1
See related
Ensembl:ENSDARG00000098315
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cyp1; zfCYP; cyp1a1; zfCYP1A; wu:fb63b04; zgc:109747
Orthologs
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Genomic context

See cyp1a in Genome Data Viewer
Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (5588068..5598958, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (5738733..5749620, complement)
103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (4974676..4985563)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 5-like 1 Neighboring gene nicotinamide nucleotide transhydrogenase 2 Neighboring gene unc-51 like kinase 3 Neighboring gene uncharacterized LOC101884251 Neighboring gene uncharacterized LOC110438080

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
cytochrome P450 1A1
Names
cytochrome P450, subfamily I, polypeptide 1
NP_571954.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131879.2NP_571954.1  cytochrome P450 1A1

    See identical proteins and their annotated locations for NP_571954.1

    Status: VALIDATED

    Source sequence(s)
    AI496734, CF997194, CU462829, EH454923, EH525844
    UniProtKB/TrEMBL
    Q8UW07
    Related
    ENSDARP00000139599.1, ENSDART00000161538.2
    Conserved Domains (1) summary
    pfam00067
    Location:46499
    p450; Cytochrome P450

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    5588068..5598958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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