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MAGEB16 MAGE family member B16 [ Homo sapiens (human) ]

Gene ID: 139604, updated on 11-Jun-2021

Summary

Official Symbol
MAGEB16provided by HGNC
Official Full Name
MAGE family member B16provided by HGNC
Primary source
HGNC:HGNC:21188
See related
Ensembl:ENSG00000189023 MIM:300762
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.3) See more
Orthologs
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Genomic context

See MAGEB16 in Genome Data Viewer
Location:
Xp21.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (35798342..35803772)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (35816459..35821889)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene CDC42 binding protein kinase beta (DMPK-like) pseudogene Neighboring gene NFYC pseudogene 1 Neighboring gene cilia and flagella associated protein 47 Neighboring gene RNA, U6 small nuclear 641, pseudogene Neighboring gene high mobility group box 1 pseudogene 16

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
melanoma-associated antigen B16
Names
MAGE-B16 antigen
melanoma antigen family B, 16 (pseudogene)
melanoma antigen family B16

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099921.2NP_001093391.1  melanoma-associated antigen B16

    See identical proteins and their annotated locations for NP_001093391.1

    Status: VALIDATED

    Source sequence(s)
    AL161722
    Consensus CDS
    CCDS43927.1
    UniProtKB/Swiss-Prot
    A2A368
    Related
    ENSP00000382871.1, ENST00000399989.5
    Conserved Domains (2) summary
    pfam12440
    Location:590
    MAGE_N; Melanoma associated antigen family N terminal
    pfam01454
    Location:120288
    MAGE; MAGE family
  2. NM_001370158.1NP_001357087.1  melanoma-associated antigen B16

    Status: VALIDATED

    Source sequence(s)
    AL161722
    Related
    ENSP00000382870.1, ENST00000399988.5
    Conserved Domains (2) summary
    pfam12440
    Location:590
    MAGE_N; Melanoma associated antigen family N terminal
    pfam01454
    Location:120288
    MAGE; MAGE family
  3. NM_001370159.1NP_001357088.1  melanoma-associated antigen B16

    Status: VALIDATED

    Source sequence(s)
    AL161722
    Related
    ENSP00000382867.1, ENST00000399985.1
    Conserved Domains (2) summary
    pfam12440
    Location:590
    MAGE_N; Melanoma associated antigen family N terminal
    pfam01454
    Location:120288
    MAGE; MAGE family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    35798342..35803772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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