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C7orf31 chromosome 7 open reading frame 31 [ Homo sapiens (human) ]

Gene ID: 136895, updated on 7-Jun-2020

Summary

Official Symbol
C7orf31provided by HGNC
Official Full Name
chromosome 7 open reading frame 31provided by HGNC
Primary source
HGNC:HGNC:21722
See related
Ensembl:ENSG00000153790 MIM:616071
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 25.6), adrenal (RPKM 2.5) and 6 other tissues See more
Orthologs

Genomic context

See C7orf31 in Genome Data Viewer
Location:
7p15.3
Exon count:
11
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (25134692..25180354, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (25164819..25219966, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 3 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 19 Neighboring gene cytochrome c, somatic Neighboring gene uncharacterized LOC105375191 Neighboring gene ribosomal protein L7a pseudogene 41

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
centrosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
centrosome IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C7orf31

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001371351.1NP_001358280.1  uncharacterized protein C7orf31

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All three variants encode the same protein.
    Source sequence(s)
    AC004129
  2. NM_001371352.1NP_001358281.1  uncharacterized protein C7orf31

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All three variants encode the same protein.
    Source sequence(s)
    AC004129
    Related
    ENSP00000386604.1, ENST00000409280.5
  3. NM_138811.4NP_620166.3  uncharacterized protein C7orf31

    See identical proteins and their annotated locations for NP_620166.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. All three variants encode the same protein.
    Source sequence(s)
    AC004129, BC043269, BC060879, BI830207, BX640851
    Consensus CDS
    CCDS5394.1
    UniProtKB/Swiss-Prot
    Q8N865
    Related
    ENSP00000283905.3, ENST00000283905.8
    Conserved Domains (1) summary
    pfam15093
    Location:1283
    DUF4555; Domain of unknown function (DUF4555)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    25134692..25180354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011515125.2XP_011513427.1  uncharacterized protein C7orf31 isoform X2

    See identical proteins and their annotated locations for XP_011513427.1

    UniProtKB/Swiss-Prot
    Q8N865
    Conserved Domains (1) summary
    pfam15093
    Location:173
    DUF4555; Domain of unknown function (DUF4555)
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