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HIMB5_00002020 D-alanine--D-alanine ligase [ alpha proteobacterium HIMB5 ]

Gene ID: 13673464, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
HIMB5_00002020
Gene description
D-alanine--D-alanine ligase
Locus tag
HIMB5_00002020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
alpha proteobacterium HIMB5 (strain: HIMB5)
Lineage
Bacteria; Proteobacteria; Alphaproteobacteria; SAR11 cluster

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
    Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
  • Peptidoglycan biosynthesis, conserved biosystem (from KEGG)
    Peptidoglycan biosynthesis, conserved biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
  • Vancomycin resistance, organism-specific biosystem (from KEGG)
    Vancomycin resistance, organism-specific biosystemVancomycin (VCM) is a glycopeptide antibiotic agent that inhibits the synthesis of peptidolgycan in the production of bacterial cell walls. It is active in most Gram-positive bacteria and acts by bin...
  • Vancomycin resistance, conserved biosystem (from KEGG)
    Vancomycin resistance, conserved biosystemVancomycin (VCM) is a glycopeptide antibiotic agent that inhibits the synthesis of peptidolgycan in the production of bacterial cell walls. It is active in most Gram-positive bacteria and acts by bin...
Names
D-alanine--D-alanine ligase
YP_006756148.1
  • PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus
    TIGRFAM: D-alanine--D-alanine ligase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018643.1 Reference assembly

    Range
    192206..193117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_006756148.1 D-alanine--D-alanine ligase [alpha proteobacterium HIMB5]

    Status: PROVISIONAL

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