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LOC136353720 photosystem II CP47 reaction center protein [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 136353720, updated on 11-Jun-2025
Gene symbol
LOC136353720
Gene description
photosystem II CP47 reaction center protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC136353720 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (11454513..11458969)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene uncharacterized LOC136353721 Neighboring gene transfer RNA leucine (anticodon CAA)

Genomic Sequence:
NC_089044.1 Chromosome 10 Reference ASM3414082v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chlorophyll binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in photosynthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosynthesis, light reaction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosynthetic electron transport in photosystem II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of photosystem II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
photosystem II CP47 reaction center protein

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    11454513..11458969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066304918.1 → XP_066161015.1  photosystem II CP47 reaction center protein

    UniProtKB/Swiss-Prot
    P0C362, P0C364, P12157, Q6QXT1, Q6QY58
    UniProtKB/TrEMBL
    A0A0K0LPT6, A0A0N6WZV1, A0A7S7YAC5, D0EKM5, D0EKM6, Q69VC8
Nucleotide Protein
Heading Accession and Version

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