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PGTG_20780 histone-lysine N-methyltransferase SETD1 [ Puccinia graminis f. sp. tritici CRL 75-36-700-3 ]

Gene ID: 13541426, updated on 25-Jan-2024

Summary

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Gene symbol
PGTG_20780
Gene description
histone-lysine N-methyltransferase SETD1
Locus tag
PGTG_20780
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Puccinia graminis f. sp. tritici CRL 75-36-700-3 (strain: CRL 75-36-700-3, forma-specialis: tritici CRL 75-36-700-3)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia
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Genomic context

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Location:
chromosome: Unknown
Exon count:
7

NW_003526550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene NADPH oxidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003526550.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Set1C/COMPASS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SETD1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003526550.1 Reference assembly

    Range
    2239481..2244995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003890707.1 → XP_003890756.1  histone-lysine N-methyltransferase SETD1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

    See identical proteins and their annotated locations for XP_003890756.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B0QY28, A0A5B0QZL7, H6QP87
    Conserved Domains (4) summary
    PHA03247
    Location:907 → 1179
    PHA03247; large tegument protein UL36; Provisional
    pfam11764
    Location:1236 → 1357
    N-SET; COMPASS (Complex proteins associated with Set1p) component N
    cd19169
    Location:1351 → 1498
    SET_SETD1; SET domain (including post-SET domain) found in SET domain-containing protein 1 (SETD1) and similar proteins
    cl17169
    Location:143 → 242
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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