U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COX7A2P2 cytochrome c oxidase subunit 7A2 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 1348, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Official Symbol
COX7A2P2provided by HGNC
Official Full Name
cytochrome c oxidase subunit 7A2 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:2290
See related
MIM:123997; AllianceGenome:HGNC:2290
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
COX7A3; COX7AL; COX7AL2; COX7AP2
Summary
Predicted to enable electron transfer activity. Predicted to be involved in mitochondrial respirasome assembly and regulation of oxidative phosphorylation. Predicted to be part of mitochondrial respiratory chain complex IV. Predicted to be active in mitochondrial respirasome. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COX7A2P2 in Genome Data Viewer
Location:
4q22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (96902763..96903189)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (100217568..100217994)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (97823914..97824340)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene talin 2 pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:97148613-97149159 Neighboring gene NANOG hESC enhancer GRCh37_chr4:97173200-97173733 Neighboring gene NANOG hESC enhancer GRCh37_chr4:97181156-97181836 Neighboring gene long intergenic non-protein coding RNA 2267 Neighboring gene MPRA-validated peak5077 silencer Neighboring gene RN7SK pseudogene 28 Neighboring gene MPRA-validated peak5080 silencer Neighboring gene MPRA-validated peak5081 silencer Neighboring gene MPRA-validated peak5082 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:97657459-97658128 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:97664441-97665640 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:97783525-97784026 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:97784027-97784526 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:98045039-98045539 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:98060958-98062157 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:98062416-98062997 Neighboring gene uncharacterized LOC124900737 Neighboring gene STPG2 antisense RNA 1 Neighboring gene sperm tail PG-rich repeat containing 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Tissue-specific expression and chromosome assignment of genes specifying two isoforms of subunit VIIa of human cytochrome c oxidase. Arnaudo E, et al. Gene, 1992 Oct 1. PMID 1327965
  2. Proteomic analysis of the cullin 4B interactome using proximity-dependent biotinylation in living cells. Zhang H, et al. Proteomics, 2017 Apr. PMID 28225217
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. Hillier LW, et al. Nature, 2005 Apr 7. PMID 15815621
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Other Names

  • H_RG162B04.1
  • WUGSC:H_RG162B04.1
  • cytochrome c oxidase subunit VIIa polypeptide 2 (liver) pseudogene 2
  • cytochrome c oxidase subunit VIIa polypeptide 3 (liver)
  • cytochrome c oxidase subunit VIIa pseudogene 2

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
  
involved_in mitochondrial respirasome assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of oxidative phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial respirasome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mitochondrial respiratory chain complex IV IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004712.5 

    Range
    101..527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    96902763..96903189
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    100217568..100217994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_183003.1: Suppressed sequence

    Description
    NM_183003.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O60397.1 GenPept UniProtKB/Swiss-Prot:O60397

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Miscellaneous