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CCDC127 coiled-coil domain containing 127 [ Homo sapiens (human) ]

Gene ID: 133957, updated on 13-Mar-2020

Summary

Official Symbol
CCDC127provided by HGNC
Official Full Name
coiled-coil domain containing 127provided by HGNC
Primary source
HGNC:HGNC:30520
See related
Ensembl:ENSG00000164366
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 10.4), ovary (RPKM 9.5) and 25 other tissues See more
Orthologs

Genomic context

See CCDC127 in Genome Data Viewer
Location:
5p15.33
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (196868..218153, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (204875..218333, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene pleckstrin homology and RhoGEF domain containing G4B Neighboring gene uncharacterized LOC107986394 Neighboring gene leucine rich repeat containing 14B Neighboring gene succinate dehydrogenase complex flavoprotein subunit A Neighboring gene heart tissue-associated transcript 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ25701

General protein information

Preferred Names
coiled-coil domain-containing protein 127

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033064.1 RefSeqGene

    Range
    5001..18423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_145265.3NP_660308.1  coiled-coil domain-containing protein 127

    See identical proteins and their annotated locations for NP_660308.1

    Status: VALIDATED

    Source sequence(s)
    AC021087, BC015349
    Consensus CDS
    CCDS3852.1
    UniProtKB/Swiss-Prot
    Q96BQ5
    Related
    ENSP00000296824.2, ENST00000296824.4
    Conserved Domains (1) summary
    cl26511
    Location:47163
    Neuromodulin_N; Gap junction protein N-terminal region

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    196868..218153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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