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ZNF474 zinc finger protein 474 [ Homo sapiens (human) ]

Gene ID: 133923, updated on 7-Jun-2020

Summary

Official Symbol
ZNF474provided by HGNC
Official Full Name
zinc finger protein 474provided by HGNC
Primary source
HGNC:HGNC:23245
See related
Ensembl:ENSG00000164185
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 4.0), lung (RPKM 1.1) and 3 other tissues See more
Orthologs

Genomic context

See ZNF474 in Genome Data Viewer
Location:
5q23.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (122129546..122153569)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (121465215..121489266)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379149 Neighboring gene uncharacterized LOC105379148 Neighboring gene serum response factor binding protein 1 Neighboring gene ZNF474 antisense RNA 1 Neighboring gene zinc finger protein 474-like Neighboring gene lysyl oxidase Neighboring gene synuclein alpha interacting protein Neighboring gene ancient vomeronasal 1 receptor pseudogene Neighboring gene uncharacterized LOC107986446 Neighboring gene uncharacterized LOC153163

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ32921

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger protein 474
Names
4933409D10Rik
TSZFP
testis-specific zinc finger protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207317.3NP_997200.1  zinc finger protein 474

    See identical proteins and their annotated locations for NP_997200.1

    Status: VALIDATED

    Source sequence(s)
    AK290985, AY461732, DB058648
    Consensus CDS
    CCDS4130.1
    UniProtKB/Swiss-Prot
    Q6S9Z5
    Related
    ENSP00000296600.4, ENST00000296600.5
    Conserved Domains (1) summary
    pfam13913
    Location:283307
    zf-C2HC_2; zinc-finger of a C2HC-type

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    122129546..122153569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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