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LDBPK_040570 spermidine synthase, putative [ Leishmania donovani ]

Gene ID: 13390730, updated on 14-Dec-2023

Summary

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Gene symbol
LDBPK_040570
Gene description
spermidine synthase, putative
Locus tag
LDBPK_040570
Gene type
protein coding
RNA name
spermidine synthase, putative
RefSeq status
PROVISIONAL
Organism
Leishmania donovani (strain: BPK282A1)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_018231.1 (240031..240933, complement)

Chromosome 4 - NC_018231.1Genomic Context describing neighboring genes Neighboring gene tyrosine phosphatase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018231.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel protein-protein interaction between spermidine synthase and S-adenosylmethionine decarboxylase from Leishmania donovani. Mishra AK, et al. Biochem Biophys Res Commun, 2015 Jan 9. PMID 25511700
  2. Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance. Downing T, et al. Genome Res, 2011 Dec. PMID 22038251, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. this study explored the possibility of and identified the protein-protein interaction between spermidine synthase and S-adenosylmethionine decarboxylase.
    Title: Novel protein-protein interaction between spermidine synthase and S-adenosylmethionine decarboxylase from Leishmania donovani.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermidine synthase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018231.1 Reference assembly

    Range
    240031..240933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003858071.1 → XP_003858119.1  spermidine synthase, putative [Leishmania donovani]

    See identical proteins and their annotated locations for XP_003858119.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3S5H5B4, E9B822, Q9GSR3
    Conserved Domains (1) summary
    cl17173
    Location:9 → 295
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases