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LOC133444738 cholesterol side-chain cleavage enzyme, mitochondrial [ Cololabis saira (Pacific saury) ]

Gene ID: 133444738, updated on 9-Jul-2024
Gene symbol
LOC133444738
Gene description
cholesterol side-chain cleavage enzyme, mitochondrial
See related
EnsemblRapid:ENSLTZG00000031698
Gene type
protein coding
RefSeq status
MODEL
Organism
Cololabis saira
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Belonidae; Cololabis
Orthologs
all
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See LOC133444738 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current fColSai1.1 (GCF_033807715.1) 5 NC_084591.1 (34851511..34854372)

Chromosome 5 - NC_084591.1Genomic Context describing neighboring genes Neighboring gene photoreceptor-specific nuclear receptor-like Neighboring gene stomatin (EPB72)-like 1 Neighboring gene signaling receptor and transporter of retinol STRA6 Neighboring gene immunoglobulin superfamily containing leucine-rich repeat 2

Genomic Sequence:
NC_084591.1 Chromosome 5 Reference fColSai1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C21-steroid hormone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to peptide hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortisol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucocorticoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cholesterol side-chain cleavage enzyme, mitochondrial

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RefSeqs of Annotated Genomes: GCF_033807715.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fColSai1.1 Primary Assembly

Genomic

  1. NC_084591.1 Reference fColSai1.1 Primary Assembly

    Range
    34851511..34854372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061722619.1 → XP_061578603.1  cholesterol side-chain cleavage enzyme, mitochondrial

    Related
    ENSLTZP00000051753.1, ENSLTZT00000065632.1
Nucleotide Protein
Heading Accession and Version

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