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C4orf36 chromosome 4 open reading frame 36 [ Homo sapiens (human) ]

Gene ID: 132989, updated on 11-Sep-2019

Summary

Official Symbol
C4orf36provided by HGNC
Official Full Name
chromosome 4 open reading frame 36provided by HGNC
Primary source
HGNC:HGNC:28386
See related
Ensembl:ENSG00000163633 Ensembl:ENSG00000285458
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.7), skin (RPKM 1.1) and 21 other tissues See more
Orthologs

Genomic context

See C4orf36 in Genome Data Viewer
Location:
4q21.3
Exon count:
8
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (86876205..86897256, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (87797358..87824820, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene solute carrier family 10 member 6 Neighboring gene ribosomal protein L6 pseudogene 13 Neighboring gene actin related protein 2/3 complex subunit 1A pseudogene Neighboring gene AFF1 antisense RNA 1 Neighboring gene AF4/FMR2 family member 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
A high-density genome-wide association screen of sporadic ALS in US veterans.
NHGRI GWA Catalog
Genetic variants associated with disordered eating.
NHGRI GWA Catalog

General gene information

Homology

Clone Names

  • MGC26744

General protein information

Preferred Names
uncharacterized protein C4orf36

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001369888.1NP_001356817.1  uncharacterized protein C4orf36

    Status: VALIDATED

    Source sequence(s)
    AC093827
    Related
    ENSP00000421141.1, ENST00000506308.5
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
  2. NM_001369889.1NP_001356818.1  uncharacterized protein C4orf36

    Status: VALIDATED

    Source sequence(s)
    AC093827
    Related
    ENSP00000420949.1, ENST00000473559.5
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
  3. NM_144645.4NP_653246.2  uncharacterized protein C4orf36

    Status: VALIDATED

    Source sequence(s)
    AC093827
    Consensus CDS
    CCDS3615.1
    Related
    ENSP00000295898.3, ENST00000295898.8
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    86876205..86897256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017007746.2XP_016863235.1  uncharacterized protein C4orf36 isoform X1

    UniProtKB/Swiss-Prot
    Q96KX1
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
  2. XM_011531613.3XP_011529915.1  uncharacterized protein C4orf36 isoform X1

    See identical proteins and their annotated locations for XP_011529915.1

    UniProtKB/Swiss-Prot
    Q96KX1
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
  3. XM_011531615.3XP_011529917.1  uncharacterized protein C4orf36 isoform X1

    See identical proteins and their annotated locations for XP_011529917.1

    UniProtKB/Swiss-Prot
    Q96KX1
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
  4. XM_011531612.3XP_011529914.1  uncharacterized protein C4orf36 isoform X1

    See identical proteins and their annotated locations for XP_011529914.1

    UniProtKB/Swiss-Prot
    Q96KX1
    Conserved Domains (1) summary
    pfam15022
    Location:1117
    DUF4522; Protein of unknown function (DUF4522)
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