NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001284401.2 → NP_001271330.1 phosphatidate cytidylyltransferase, mitochondrial isoform a precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AK092776, AL561371, AL561480, BC015088, BM678701, DB475191
- Consensus CDS
-
CCDS68345.1
- UniProtKB/Swiss-Prot
-
Q96BW9
- Related
- ENSP00000398596.1, ENST00000455809.6
- Conserved Domains (1) summary
-
- pfam09139
Location:13 → 327
- Mmp37; Mitochondrial matrix Mmp37
-
NM_001321294.2 → NP_001308223.1 phosphatidate cytidylyltransferase, mitochondrial isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an additional exon, and it thus differs in its 5' UTR and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (c) has a distinct and shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AC090958, AK092776, AL561371, AL561480, BC015088, BM678701, DB155729, DB475191
- UniProtKB/Swiss-Prot
-
Q96BW9
- Conserved Domains (1) summary
-
- pfam09139
Location:5 → 286
- Mmp37; Mitochondrial matrix Mmp37
-
NM_001321295.2 → NP_001308224.1 phosphatidate cytidylyltransferase, mitochondrial isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains two additional exons, and it thus differs in its 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AC090958, AK092776, AL561371, AL561480, BC015088, BM678701, BM821725, DB155729, DB475191
- UniProtKB/Swiss-Prot
-
Q96BW9
- Conserved Domains (1) summary
-
- pfam09139
Location:1 → 161
- Mmp37; Mitochondrial matrix Mmp37
-
NM_001366031.2 → NP_001352960.1 phosphatidate cytidylyltransferase, mitochondrial isoform e precursor
Status: VALIDATED
- Source sequence(s)
-
AC090958
- UniProtKB/TrEMBL
-
A0A0G2JQ92
- Conserved Domains (1) summary
-
- pfam09139
Location:13 → 236
- Mmp37; Mitochondrial matrix Mmp37
-
NM_001394474.1 → NP_001381403.1 phosphatidate cytidylyltransferase, mitochondrial isoform f
Status: VALIDATED
- Source sequence(s)
-
AC090939, AC090958
- Consensus CDS
-
CCDS93211.1
- UniProtKB/Swiss-Prot
- B4DIY7, C9J2U4, Q96BW9
- Related
- ENSP00000388598.2, ENST00000444133.6
- Conserved Domains (1) summary
-
- pfam09139
Location:13 → 316
- Mmp37; Mitochondrial matrix Mmp37
-
NM_138807.4 → NP_620162.1 phosphatidate cytidylyltransferase, mitochondrial isoform b precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1, resulting in an isoform (b) that is shorter than isoform a.
- Source sequence(s)
-
BC015088, BM678701, DB475191
- Consensus CDS
-
CCDS2607.1
- UniProtKB/Swiss-Prot
-
Q96BW9
- Related
- ENSP00000273037.5, ENST00000273037.9
- Conserved Domains (1) summary
-
- pfam09139
Location:13 → 303
- Mmp37; Mitochondrial matrix Mmp37
RNA
-
NR_104314.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) includes two additional internal exons and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because use of the expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK092776, BC015088, BM678701, DB475191
- Related
-
ENST00000457498.5
-
NR_135609.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) contains three additional exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC090939, AC090958, AK092776, AK303598, AL561371, AL561480, BC015088, BM678701, BM821725, DB155729, DB475191
-
NR_135610.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) contains two additional exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC090939, AC090958, AK092776, AL561371, AL561480, BC015088, BM678701, BM821725, DB155729, DB475191
-
NR_135611.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) contains an additional exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC090939, AK092776, AL561371, AL561480, BC015088, BM678701, DB475191
-
NR_158710.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090939, AC090958
-
NR_158711.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090939, AC090958
-
NR_158712.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090939, AC090958
-
NR_158713.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090958
-
NR_158714.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090939, AC090958
-
NR_158715.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC090958
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
11721896..11846885 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017005725.3 → XP_016861214.1 phosphatidate cytidylyltransferase, mitochondrial isoform X1
-
XM_005264875.5 → XP_005264932.1 phosphatidate cytidylyltransferase, mitochondrial isoform X4
- Conserved Domains (1) summary
-
- pfam09139
Location:13 → 187
- Mmp37; Mitochondrial matrix Mmp37
-
XM_017005726.3 → XP_016861215.1 phosphatidate cytidylyltransferase, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
A0A0G2JQ92
-
XM_047447457.1 → XP_047303413.1 phosphatidate cytidylyltransferase, mitochondrial isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NW_003871060.2 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
141534..172127
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
11717623..11842634 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345262.1 → XP_054201237.1 phosphatidate cytidylyltransferase, mitochondrial isoform X1
-
XM_054345265.1 → XP_054201240.1 phosphatidate cytidylyltransferase, mitochondrial isoform X4
-
XM_054345263.1 → XP_054201238.1 phosphatidate cytidylyltransferase, mitochondrial isoform X2
-
XM_054345264.1 → XP_054201239.1 phosphatidate cytidylyltransferase, mitochondrial isoform X3