Format

Send to:

Choose Destination

Y50D7A.13 ZnMc domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 13188188, updated on 6-May-2021

Summary

Gene symbol
Y50D7A.13
Gene description
ZnMc domain-containing protein
Primary source
WormBase:WBGene00194737
Locus tag
CELE_Y50D7A.13
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Y50D7A.13 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (289464..294627, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene General transcription and DNA repair factor IIH helicase subunit XPD Neighboring gene ncRNA Neighboring gene Translational Activator of Cytochrome c Oxidase Neighboring gene F-box domain-containing protein Neighboring gene ncRNA Neighboring gene Alkyldihydroxyacetonephosphate synthase Neighboring gene ADF-H domain-containing protein

General gene information

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ZnMc domain-containing protein
NP_001299905.1
  • Confirmed by transcript evidence
NP_001299906.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    289464..294627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001312976.2NP_001299905.1  ZnMc domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ARD1
    Conserved Domains (1) summary
    cd04278
    Location:26193
    ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
  2. NM_001312977.1NP_001299906.1  ZnMc domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUX6
    Conserved Domains (1) summary
    cl00064
    Location:129
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
Support Center