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A458_RS30765 ATP-dependent DNA ligase [ Pseudomonas stutzeri CCUG 29243 ]

Gene ID: 13146758, updated on 20-Aug-2016
Gene symbol
A458_RS30765
Gene description
ATP-dependent DNA ligase
Locus tag
A458_RS30765
Gene type
protein coding
Organism
Pseudomonas stutzeri CCUG 29243 (strain: CCUG 29243)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
A458_09030
Sequence:
NC_018028.1 (1948478..1950187, complement)

NC_018028.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene DEAD/DEAH box helicase Neighboring gene DEAD/DEAH box helicase Neighboring gene exonuclease Neighboring gene acyl-CoA dehydrogenase

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • DNA replication, organism-specific biosystem (from KEGG)
    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
Names
ATP-dependent DNA ligase
WP_014820036.1
  • catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018028.1 Reference assembly

    Range
    1948478..1950187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014820036.1 ATP-dependent DNA ligase [Pseudomonas stutzeri]

    See identical proteins and their annotated locations for WP_014820036.1

    UniProtKB/TrEMBL
    I4CSJ5
    Conserved Domains (4) summary
    cd07972
    Location:443566
    OBF_DNA_ligase_Arch_LigB; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of archaeal and bacterial ATP-dependent DNA ligases is a DNA-binding module that is part of the catalytic core unit
    cd07897
    Location:207441
    Adenylation_DNA_ligase_Bac1; Adenylation domain of putative bacterial ATP-dependent DNA ligases
    PRK09247
    Location:1568
    PRK09247; ATP-dependent DNA ligase; Validated
    pfam04675
    Location:2156
    DNA_ligase_A_N; DNA ligase N terminus
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