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SMARCE1 SWI/SNF related BAF chromatin remodeling complex subunit E1 [ Ahaetulla prasina ]

Gene ID: 131198872, updated on 20-Sep-2024
Gene symbol
SMARCE1
Gene description
SWI/SNF related BAF chromatin remodeling complex subunit E1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ahaetulla prasina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Ahaetuliinae; Ahaetulla
Orthologs
all
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Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2864084v1 (GCF_028640845.1) 4 NC_080542.1 (43211233..43255543)

Chromosome 4 - NC_080542.1Genomic Context describing neighboring genes Neighboring gene keratin, type I cytoskeletal 24-like Neighboring gene keratin 222 Neighboring gene uncharacterized LOC131198874 Neighboring gene C-C motif chemokine receptor 7 Neighboring gene uncharacterized LOC131197053 Neighboring gene tensin 4

Genomic Sequence:
NC_080542.1 Chromosome 4 Reference ASM2864084v1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosomal DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Names
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1

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RefSeqs of Annotated Genomes: GCF_028640845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2864084v1

Genomic

  1. NC_080542.1 Reference ASM2864084v1

    Range
    43211233..43255543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058184022.1 → XP_058040005.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1

  2. XM_058184023.1 → XP_058040006.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X2

  3. XM_058184020.1 → XP_058040003.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1

  4. XM_058184021.1 → XP_058040004.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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