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KCTD18 potassium channel tetramerization domain containing 18 [ Homo sapiens (human) ]

Gene ID: 130535, updated on 21-Dec-2019

Summary

Official Symbol
KCTD18provided by HGNC
Official Full Name
potassium channel tetramerization domain containing 18provided by HGNC
Primary source
HGNC:HGNC:26446
See related
Ensembl:ENSG00000155729
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
6530404F10Rik
Expression
Ubiquitous expression in thyroid (RPKM 8.4), prostate (RPKM 6.2) and 25 other tissues See more
Orthologs

Genomic context

See KCTD18 in Genome Data Viewer
Location:
2q33.1
Exon count:
7
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (200488958..200510068, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (201353677..201374817, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated serine rich 2 like Neighboring gene uncharacterized LOC107985786 Neighboring gene uncharacterized LOC101927741 Neighboring gene shugoshin 2 Neighboring gene aldehyde oxidase 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ31322, FLJ37818

Gene Ontology Provided by GOA

Process Evidence Code Pubs
protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
BTB/POZ domain-containing protein KCTD18
Names
potassium channel tetramerisation domain containing 18

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001321547.2NP_001308476.1  BTB/POZ domain-containing protein KCTD18 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK095137, AK290867, BC067755, DA343572
    Consensus CDS
    CCDS2330.1
    UniProtKB/Swiss-Prot
    Q6PI47
    UniProtKB/TrEMBL
    A8K4A2
    Related
    ENSP00000386751.1, ENST00000409157.5
    Conserved Domains (2) summary
    smart00225
    Location:1298
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cl02518
    Location:1498
    BTB; BTB/POZ domain
  2. NM_001321548.2NP_001308477.1  BTB/POZ domain-containing protein KCTD18 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC012459
  3. NM_001321550.2NP_001308479.1  BTB/POZ domain-containing protein KCTD18 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC012459
  4. NM_152387.4NP_689600.2  BTB/POZ domain-containing protein KCTD18 isoform 1

    See identical proteins and their annotated locations for NP_689600.2

    Status: VALIDATED

    Source sequence(s)
    BC045189, BU181789, CB960352, DA343572
    Consensus CDS
    CCDS2330.1
    UniProtKB/Swiss-Prot
    Q6PI47
    Related
    ENSP00000352941.3, ENST00000359878.8
    Conserved Domains (2) summary
    smart00225
    Location:1298
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cl02518
    Location:1498
    BTB; BTB/POZ domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    200488958..200510068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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