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PLEKHH2 pleckstrin homology, MyTH4 and FERM domain containing H2 [ Homo sapiens (human) ]

Gene ID: 130271, updated on 2-Mar-2021

Summary

Official Symbol
PLEKHH2provided by HGNC
Official Full Name
pleckstrin homology, MyTH4 and FERM domain containing H2provided by HGNC
Primary source
HGNC:HGNC:30506
See related
Ensembl:ENSG00000152527 MIM:612723
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PLEKHH1L
Expression
Broad expression in lung (RPKM 15.4), endometrium (RPKM 10.8) and 21 other tissues See more
Orthologs
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Genomic context

See PLEKHH2 in Genome Data Viewer
Location:
2p21
Exon count:
34
Annotation release Status Assembly Chr Location
109.20210226 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (43637260..43767987)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (43864399..43995126)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene THADA armadillo repeat containing Neighboring gene RNA, U6 small nuclear 958, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 531, pseudogene Neighboring gene Sharpr-MPRA regulatory region 13975 Neighboring gene zinc finger protein 106 homolog (mouse) pseudogene Neighboring gene C1GALT1 specific chaperone 1 like Neighboring gene uncharacterized LOC105374571 Neighboring gene RN7SK pseudogene 66 Neighboring gene dynein cytoplasmic 2 light intermediate chain 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA2028

Gene Ontology Provided by GOA

Function Evidence Code Pubs
actin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
identical protein binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
negative regulation of actin filament depolymerization ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
cortical actin cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
 
lamellipodium IDA
Inferred from Direct Assay
more info
PubMed 
nuclear body IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
pleckstrin homology domain-containing family H member 2
Names
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172069.4NP_742066.2  pleckstrin homology domain-containing family H member 2

    See identical proteins and their annotated locations for NP_742066.2

    Status: VALIDATED

    Source sequence(s)
    AC011242, AL833400, BC031914, BC063310
    Consensus CDS
    CCDS1812.1
    UniProtKB/Swiss-Prot
    Q8IVE3
    Related
    ENSP00000282406.4, ENST00000282406.9
    Conserved Domains (8) summary
    smart00795
    Location:322410
    Agro_virD5; Agrobacterium VirD5 protein
    smart00139
    Location:9551110
    MyTH4; Domain in Myosin and Kinesin Tails
    smart00233
    Location:812914
    PH; Pleckstrin homology domain
    smart00295
    Location:11231354
    B41; Band 4.1 homologues
    cd13206
    Location:13501449
    FERM_C-lobe_PLEKHH1_PLEKHH2; FERM domain C-lobe of Pleckstrin homology domain-containing family H
    cd13282
    Location:706801
    PH1_PLEKHH1_PLEKHH2; Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1
    pfam00169
    Location:704797
    PH; PH domain
    pfam00373
    Location:12291354
    FERM_M; FERM central domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210226

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    43637260..43767987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017003353.1XP_016858842.1  pleckstrin homology domain-containing family H member 2 isoform X4

    UniProtKB/Swiss-Prot
    Q8IVE3
    Conserved Domains (7) summary
    smart00139
    Location:392547
    MyTH4; Domain in Myosin and Kinesin Tails
    smart00233
    Location:249351
    PH; Pleckstrin homology domain
    smart00295
    Location:560791
    B41; Band 4.1 homologues
    cd13206
    Location:787886
    FERM_C-lobe_PLEKHH1_PLEKHH2; FERM domain C-lobe of Pleckstrin homology domain-containing family H
    cd13282
    Location:143238
    PH1_PLEKHH1_PLEKHH2; Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1
    pfam00169
    Location:141234
    PH; PH domain
    pfam00373
    Location:666791
    FERM_M; FERM central domain
  2. XM_017003352.1XP_016858841.1  pleckstrin homology domain-containing family H member 2 isoform X3

  3. XM_017003351.2XP_016858840.1  pleckstrin homology domain-containing family H member 2 isoform X1

  4. XM_024452695.1XP_024308463.1  pleckstrin homology domain-containing family H member 2 isoform X2

    Conserved Domains (6) summary
    smart00139
    Location:8901045
    MyTH4; Domain in Myosin and Kinesin Tails
    smart00233
    Location:747849
    PH; Pleckstrin homology domain
    smart00295
    Location:10581289
    B41; Band 4.1 homologues
    cd13206
    Location:12851384
    FERM_C-lobe_PLEKHH1_PLEKHH2; FERM domain C-lobe of Pleckstrin homology domain-containing family H
    cd13282
    Location:641736
    PH1_PLEKHH1_PLEKHH2; Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1
    cl26511
    Location:2213
    Neuromodulin_N; Gap junction protein N-terminal region

RNA

  1. XR_426981.2 RNA Sequence

  2. XR_001738622.1 RNA Sequence

  3. XR_939657.2 RNA Sequence

  4. XR_001738620.1 RNA Sequence

  5. XR_001738621.1 RNA Sequence

    Related
    ENST00000405223.6
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