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CFAP210 cilia and flagella associated protein 210 [ Homo sapiens (human) ]

Gene ID: 129881, updated on 25-Jan-2022

Summary

Official Symbol
CFAP210provided by HGNC
Official Full Name
cilia and flagella associated protein 210provided by HGNC
Primary source
HGNC:HGNC:25064
See related
Ensembl:ENSG00000154479 AllianceGenome:HGNC:25064
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C2orf77; CCDC173
Expression
Restricted expression toward testis (RPKM 36.5) See more
Orthologs
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Genomic context

See CFAP210 in Genome Data Viewer
Location:
2q31.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (169645425..169694405, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (170501935..170550915, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene FAST kinase domains 1 Neighboring gene peptidylprolyl isomerase G Neighboring gene CYFIP related Rac1 interactor B pseudogene Neighboring gene PHOSPHO2-KLHL23 readthrough Neighboring gene phosphatase, orphan 2 Neighboring gene kelch like family member 23

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
coiled-coil domain-containing protein 173
Names
coiled-coil domain containing 173

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085447.2NP_001078916.1  coiled-coil domain-containing protein 173

    See identical proteins and their annotated locations for NP_001078916.1

    Status: VALIDATED

    Source sequence(s)
    AC016772, BC117445, BQ432665, CB250451
    Consensus CDS
    CCDS46445.1
    UniProtKB/Swiss-Prot
    Q0VFZ6
    UniProtKB/TrEMBL
    B4DX81
    Related
    ENSP00000391504.1, ENST00000447353.6
    Conserved Domains (1) summary
    pfam13868
    Location:148480
    TPH; Trichohyalin-plectin-homology domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    169645425..169694405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011510590.1XP_011508892.1  coiled-coil domain-containing protein 173 isoform X2

    Conserved Domains (1) summary
    pfam13868
    Location:67399
    TPH; Trichohyalin-plectin-homology domain
  2. XM_011510589.1XP_011508891.1  coiled-coil domain-containing protein 173 isoform X1

    Conserved Domains (1) summary
    pfam13868
    Location:124456
    TPH; Trichohyalin-plectin-homology domain
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