Format

Send to:

Choose Destination

Crip1 cysteine-rich protein 1 (intestinal) [ Mus musculus (house mouse) ]

Gene ID: 12925, updated on 24-Jul-2018

Summary

Official Symbol
Crip1provided by MGI
Official Full Name
cysteine-rich protein 1 (intestinal)provided by MGI
Primary source
MGI:MGI:88501
See related
Ensembl:ENSMUSG00000006360 Vega:OTTMUSG00000052481
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CRHP; CRP1; Crip
Expression
Biased expression in large intestine adult (RPKM 3684.4), small intestine adult (RPKM 2998.6) and 10 other tissues See more
Orthologs

Genomic context

See Crip1 in Genome Data Viewer
Location:
12 F1; 12 61.59 cM
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (113152012..113153879)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (114390223..114392090)

Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene cysteine rich protein 2 Neighboring gene predicted gene, 30599 Neighboring gene tubulin epsilon and delta complex 1 Neighboring gene transmembrane protein 121

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
AT DNA binding ISO
Inferred from Sequence Orthology
more info
 
AT DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
DNA binding, bending ISO
Inferred from Sequence Orthology
more info
 
DNA binding, bending ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
peptide binding ISO
Inferred from Sequence Orthology
more info
 
peptide binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
zinc ion binding ISO
Inferred from Sequence Orthology
more info
 
zinc ion binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
cellular response to UV-B ISO
Inferred from Sequence Orthology
more info
 
cellular response to UV-B ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
cellular response to antibiotic ISO
Inferred from Sequence Orthology
more info
 
cellular response to antibiotic ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
intrinsic apoptotic signaling pathway in response to DNA damage ISO
Inferred from Sequence Orthology
more info
 
intrinsic apoptotic signaling pathway in response to DNA damage ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
response to zinc ion ISO
Inferred from Sequence Orthology
more info
 
response to zinc ion ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
cysteine-rich protein 1
Names
CRP-1
cysteine-rich intestinal protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007763.3NP_031789.1  cysteine-rich protein 1

    See identical proteins and their annotated locations for NP_031789.1

    Status: VALIDATED

    Source sequence(s)
    AK008269, BX511593, DT908028
    Consensus CDS
    CCDS26205.1
    UniProtKB/Swiss-Prot
    P63254
    Related
    ENSMUSP00000006523.7, ENSMUST00000006523.11
    Conserved Domains (1) summary
    cd09478
    Location:457
    LIM_CRIP; The LIM domain of Cysteine-Rich Intestinal Protein (CRIP)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

    Range
    113152012..113153879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCm38.p4 129S1/SvImJ

Genomic

  1. NT_114985.3 Reference GRCm38.p4 129S1/SvImJ

    Range
    22818..24671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCm38.p4 129S7/SvEvBrd-Hprt-b-m2

Genomic

  1. NT_166322.1 Reference GRCm38.p4 129S7/SvEvBrd-Hprt-b-m2

    Range
    14017..15870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center