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MELTF melanotransferrin [ Pongo pygmaeus (Bornean orangutan) ]

Gene ID: 129032729, updated on 26-Mar-2024

Summary

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Gene symbol
MELTF
Gene description
melanotransferrin
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo pygmaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See MELTF in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonPyg2-v2.0_pri (GCF_028885625.2) 2 NC_085930.1 (207285797..207316396, complement)
RS_2023_04 previous assembly NHGRI_mPonPyg2-v1.1-hic.freeze_pri (GCF_028885625.1) 3 NC_072376.1 (207158763..207189301, complement)

Chromosome 2 - NC_085930.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein uS2B-like Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Z Neighboring gene discs large MAGUK scaffold protein 1 Neighboring gene uncharacterized LOC134739110

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanotransferrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885625.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonPyg2-v2.0_pri Primary Assembly

Genomic

  1. NC_085930.1 Reference NHGRI_mPonPyg2-v2.0_pri Primary Assembly

    Range
    207285797..207316396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054480484.2 → XP_054336459.1  melanotransferrin isoform X1

  2. XM_063661365.1 → XP_063517435.1  melanotransferrin isoform X4

  3. XM_063661363.1 → XP_063517433.1  melanotransferrin isoform X2

  4. XM_054480486.2 → XP_054336461.1  melanotransferrin isoform X5

  5. XM_063661364.1 → XP_063517434.1  melanotransferrin isoform X3

  6. XM_054480487.2 → XP_054336462.1  melanotransferrin isoform X6

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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