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C20orf144 chromosome 20 open reading frame 144 [ Homo sapiens (human) ]

Gene ID: 128864, updated on 5-Aug-2022

Summary

Official Symbol
C20orf144provided by HGNC
Official Full Name
chromosome 20 open reading frame 144provided by HGNC
Primary source
HGNC:HGNC:16137
See related
Ensembl:ENSG00000149609 AllianceGenome:HGNC:16137
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
dJ63M2.6
Expression
Restricted expression toward testis (RPKM 16.1) See more
Orthologs
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Genomic context

See C20orf144 in Genome Data Viewer
Location:
20q11.22
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (33662327..33663908)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (35388858..35390439)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (32250133..32251714)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs2173 Neighboring gene syntrophin alpha 1 Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 2 Neighboring gene Sharpr-MPRA regulatory region 10659 Neighboring gene N-terminal EF-hand calcium binding protein 3 Neighboring gene actin like 10 Neighboring gene E2F transcription factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
uncharacterized protein C20orf144
Names
bcl-2-like protein from testis
bclt

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080825.4NP_543015.1  uncharacterized protein C20orf144

    See identical proteins and their annotated locations for NP_543015.1

    Status: VALIDATED

    Source sequence(s)
    BX378327, DQ080434
    Consensus CDS
    CCDS13223.1
    UniProtKB/Swiss-Prot
    Q1AHR2, Q9BQM9
    Related
    ENSP00000364370.3, ENST00000375222.4
    Conserved Domains (1) summary
    pfam15318
    Location:1150
    Bclt; Putative Bcl-2 like protein of testis

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    33662327..33663908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    35388858..35390439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)