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Cox17 cytochrome c oxidase assembly protein 17, copper chaperone [ Mus musculus (house mouse) ]

Gene ID: 12856, updated on 12-Aug-2018

Summary

Official Symbol
Cox17provided by MGI
Official Full Name
cytochrome c oxidase assembly protein 17, copper chaperoneprovided by MGI
Primary source
MGI:MGI:1333806
See related
Ensembl:ENSMUSG00000046516 Vega:OTTMUSG00000026953
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI037035
Expression
Ubiquitous expression in liver E14 (RPKM 48.4), placenta adult (RPKM 37.3) and 28 other tissues See more
Orthologs

Genomic context

See Cox17 in Genome Data Viewer
Location:
16; 16 B3-B4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (38346983..38352763)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (38347085..38352849)

Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1, group I, member 2 Neighboring gene MYCBP-associated, testis expressed 1 Neighboring gene popeye domain containing 2 Neighboring gene phospholipase A1 member A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
copper chaperone activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
copper chaperone activity ISO
Inferred from Sequence Orthology
more info
 
copper ion binding IDA
Inferred from Direct Assay
more info
PubMed 
cuprous ion binding ISO
Inferred from Sequence Orthology
more info
 
enzyme activator activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
mitochondrial respiratory chain complex IV assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial respiratory chain complex IV assembly ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cytochrome-c oxidase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
mitochondrial intermembrane space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
 
mitochondrion HDA PubMed 

General protein information

Preferred Names
cytochrome c oxidase copper chaperone
Names
cytochrome c oxidase assembly protein 17
cytochrome c oxidase, subunit XVII assembly protein homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017429.2NP_001017429.1  cytochrome c oxidase copper chaperone

    See identical proteins and their annotated locations for NP_001017429.1

    Status: VALIDATED

    Source sequence(s)
    BC048668, BG792513
    Consensus CDS
    CCDS28165.1
    UniProtKB/Swiss-Prot
    P56394
    UniProtKB/TrEMBL
    Q54AC6
    Related
    ENSMUSP00000054086.8, OTTMUSP00000029922, ENSMUST00000050273.8, OTTMUST00000061131
    Conserved Domains (1) summary
    pfam05051
    Location:1862
    COX17; Cytochrome C oxidase copper chaperone (COX17)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

    Range
    38346983..38352763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521750.3XP_006521813.1  cytochrome c oxidase copper chaperone isoform X1

    See identical proteins and their annotated locations for XP_006521813.1

    UniProtKB/Swiss-Prot
    P56394
    UniProtKB/TrEMBL
    Q54AC6
    Related
    ENSMUSP00000113430.1, OTTMUSP00000030032, ENSMUST00000120495.1, OTTMUST00000061133
    Conserved Domains (1) summary
    pfam05051
    Location:1862
    COX17; Cytochrome C oxidase copper chaperone (COX17)
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