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AgaP_AGAP001944 AGAP001944-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1281180, updated on 28-Apr-2018

Summary

Gene symbol
AgaP_AGAP001944
Gene description
AGAP001944-PA
Primary source
VectorBase:AGAP001944
Locus tag
AgaP_AGAP001944
Gene type
protein coding
RNA name
AGAP001944-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000015962; ENSANGG00000015962

Genomic context

See AgaP_AGAP001944 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
10
Sequence:
Chromosome: 2R; NT_078266.2 (12692620..12717413)

Chromosome 2R - NT_078266.2Genomic Context describing neighboring genes Neighboring gene AGAP001941-PA Neighboring gene AGAP001942-PA Neighboring gene AGAP001943-PA Neighboring gene AGAP001945-PA Neighboring gene AGAP001946-PA

Pathways from BioSystems

  • Hedgehog signaling pathway - fly, organism-specific biosystem (from KEGG)
    Hedgehog signaling pathway - fly, organism-specific biosystemHedgehog (Hh) signaling plays essential roles in embryonic development and adult tissue homeostasis. It is first elucidated by genetic studies in Drosophila and the core of the Hh signaling pathway i...
  • SCF-BTRC complex, organism-specific biosystem (from KEGG)
    SCF-BTRC complex, organism-specific biosystemStructural complex; Genetic information processing; Ubiquitin system
  • SCF-BTRC complex, conserved biosystem (from KEGG)
    SCF-BTRC complex, conserved biosystemStructural complex; Genetic information processing; Ubiquitin system
  • Toll and Imd signaling pathway, organism-specific biosystem (from KEGG)
    Toll and Imd signaling pathway, organism-specific biosystemInsects, such as Drosophila, have evolved complex mechanisms to combat microbial infection. TOLL and IMD pathways are responsible for the immune response that functions through the production of anti...
  • Toll and Imd signaling pathway, conserved biosystem (from KEGG)
    Toll and Imd signaling pathway, conserved biosystemInsects, such as Drosophila, have evolved complex mechanisms to combat microbial infection. TOLL and IMD pathways are responsible for the immune response that functions through the production of anti...
  • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
    Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
  • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
    Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
  • Wnt signaling pathway, organism-specific biosystem (from KEGG)
    Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
  • Wnt signaling pathway, conserved biosystem (from KEGG)
    Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

General gene information

Homology

General protein information

Preferred Names
AGAP001944-PA
XP_321118.5
  • AGAP001944-PA encoded by AGAP001944-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078266.2 Reference assembly

    Range
    12692620..12717413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_321118.5XP_321118.5  AGAP001944-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_321118.5

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PYH7
    Conserved Domains (5) summary
    COG2319
    Location:193495
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:211489
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12125
    Location:4886
    Beta-TrCP_D; D domain of beta-TrCP
    pfam12937
    Location:90137
    F-box-like; F-box-like
    sd00039
    Location:214249
    7WD40; WD40 repeat [structural motif]
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