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AgaP_AGAP009002 AGAP009002-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1279961, updated on 28-Apr-2018

Summary

Gene symbol
AgaP_AGAP009002
Gene description
AGAP009002-PA
Primary source
VectorBase:AGAP009002
Locus tag
AgaP_AGAP009002
Gene type
protein coding
RNA name
AGAP009002-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000014727; ENSANGG00000014727

Genomic context

See AgaP_AGAP009002 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
11
Sequence:
Chromosome: 3R; NT_078268.4 (23117153..23136730)

Chromosome 3R - NT_078268.4Genomic Context describing neighboring genes Neighboring gene AGAP009000-PA Neighboring gene AGAP009001-PA Neighboring gene AGAP009003-PA Neighboring gene AGAP009004-PA

General gene information

Homology

  • Homologs of the AgaP_AGAP009002 gene: The AgaP_AGAP009002 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, and frog.

General protein information

Preferred Names
AGAP009002-PA
XP_319750.4
  • AGAP009002-PA encoded by AGAP009002-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078268.4 Reference assembly

    Range
    23117153..23136730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_319750.4XP_319750.4  AGAP009002-PA, partial [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_319750.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PWD9
    Conserved Domains (2) summary
    cd06939
    Location:387629
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:27121
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
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