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AgaP_AGAP008263 AGAP008263-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1277723, updated on 28-Apr-2018

Summary

Gene symbol
AgaP_AGAP008263
Gene description
AGAP008263-PA
Primary source
VectorBase:AGAP008263
Locus tag
AgaP_AGAP008263
Gene type
protein coding
RNA name
AGAP008263-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000009504; ENSANGG00000009504

Genomic context

See AgaP_AGAP008263 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
5
Sequence:
Chromosome: 3R; NT_078268.4 (8077879..8080938, complement)

Chromosome 3R - NT_078268.4Genomic Context describing neighboring genes Neighboring gene AGAP008261-PA Neighboring gene AGAP008262-PA Neighboring gene AGAP008264-PA Neighboring gene AGAP008265-PA

Pathways from BioSystems

  • Spliceosome, organism-specific biosystem (from KEGG)
    Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • Spliceosome, conserved biosystem (from KEGG)
    Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
  • mRNA processing, organism-specific biosystem (from WikiPathways)
    mRNA processing, organism-specific biosystemThis process describes the conversion of precursor messenger RNA into mature messenger RNA (mRNA). The pre-mRNA molecule undergoes three main modifications. These modifications are 5' capping, 3' pol...

General gene information

Homology

General protein information

Preferred Names
AGAP008263-PA
XP_317209.4
  • AGAP008263-PA encoded by AGAP008263-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078268.4 Reference assembly

    Range
    8077879..8080938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_317209.4XP_317209.4  AGAP008263-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_317209.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PNE5
    Conserved Domains (4) summary
    COG5104
    Location:55660
    PRP40; Splicing factor [RNA processing and modification]
    cd00201
    Location:5683
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    pfam00397
    Location:95122
    WW; WW domain
    pfam01846
    Location:258307
    FF; FF domain
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