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AgaP_AGAP008300 AGAP008300-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1277684, updated on 28-Apr-2018

Summary

Gene symbol
AgaP_AGAP008300
Gene description
AGAP008300-PA
Primary source
VectorBase:AGAP008300
Locus tag
AgaP_AGAP008300
Gene type
protein coding
RNA name
AGAP008300-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000005077; ENSANGG00000005077

Genomic context

See AgaP_AGAP008300 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
3
Sequence:
Chromosome: 3R; NT_078268.4 (8742452..8744293, complement)

Chromosome 3R - NT_078268.4Genomic Context describing neighboring genes Neighboring gene AGAP008298-PA Neighboring gene AGAP008299-PA Neighboring gene AGAP008301-PA Neighboring gene AGAP008302-PA

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Homology

  • Homologs of the AgaP_AGAP008300 gene: The AgaP_AGAP008300 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

General protein information

Preferred Names
AGAP008300-PA
XP_317165.4
  • AGAP008300-PA encoded by AGAP008300-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078268.4 Reference assembly

    Range
    8742452..8744293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_317165.4XP_317165.4  AGAP008300-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_317165.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PJ82
    Conserved Domains (3) summary
    cd01335
    Location:98344
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:23548
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
    pfam16199
    Location:316394
    Radical_SAM_C; Radical_SAM C-terminal domain
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