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TEDDM1 transmembrane epididymal protein 1 [ Homo sapiens (human) ]

Gene ID: 127670, updated on 13-May-2022

Summary

Official Symbol
TEDDM1provided by HGNC
Official Full Name
transmembrane epididymal protein 1provided by HGNC
Primary source
HGNC:HGNC:30233
See related
Ensembl:ENSG00000203730 AllianceGenome:HGNC:30233
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HE9; EDDM9; Epdd1; TMEM45C; HEL-S-45e
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See TEDDM1 in Genome Data Viewer
Location:
1q25.3
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (182398117..182400667, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (181757690..181760240, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (182367252..182369802, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr1.10230 Neighboring gene Sharpr-MPRA regulatory region 13543 Neighboring gene glutamate-ammonia ligase Neighboring gene long intergenic non-protein coding RNA 272 Neighboring gene transmembrane epididymal protein 2, pseudogene

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane epididymal protein 1
Names
epididymal protein 9
epididymis secretory sperm binding protein Li 45e
human epididymis-specific protein 9
putative membrane protein HE9
transmembrane protein 45C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172000.4NP_741997.3  transmembrane epididymal protein 1

    See identical proteins and their annotated locations for NP_741997.3

    Status: VALIDATED

    Source sequence(s)
    AL139344
    Consensus CDS
    CCDS30953.1
    UniProtKB/Swiss-Prot
    Q5T9Z0
    Related
    ENSP00000356536.1, ENST00000367565.2
    Conserved Domains (1) summary
    pfam04819
    Location:100217
    DUF716; Family of unknown function (DUF716)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    182398117..182400667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    181757690..181760240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)