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AgaP_AGAP005640 AGAP005640-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1276326, updated on 20-Sep-2020

Summary

Gene symbol
AgaP_AGAP005640
Gene description
AGAP005640-PA
Primary source
VectorBase:AGAP005640
Locus tag
AgaP_AGAP005640
Gene type
protein coding
RNA name
AGAP005640-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000005501; ENSANGG00000005501

Genomic context

See AgaP_AGAP005640 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
5
Sequence:
Chromosome: 2L; NT_078265.2 (18121372..18124666)

Chromosome 2L - NT_078265.2Genomic Context describing neighboring genes Neighboring gene AGAP005638-PA Neighboring gene AGAP005639-PA Neighboring gene AGAP005641-PA Neighboring gene AGAP005642-PA Neighboring gene AGAP005643-PA

Pathways from PubChem

General gene information

Homology

  • Homologs of the AgaP_AGAP005640 gene: The AgaP_AGAP005640 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
AGAP005640-PA
XP_315659.1
  • AGAP005640-PA encoded by AGAP005640-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078265.2 Reference assembly

    Range
    18121372..18124666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_315659.2XP_315659.1  AGAP005640-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_315659.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7Q6W1
    Conserved Domains (5) summary
    smart00386
    Location:434466
    HAT; HAT (Half-A-TPR) repeats
    sd00006
    Location:665694
    TPR; TPR repeat [structural motif]
    pfam06424
    Location:22173
    PRP1_N; PRP1 splicing factor, N-terminal
    pfam13432
    Location:672732
    TPR_16; Tetratricopeptide repeat
    pfam14559
    Location:611674
    TPR_19; Tetratricopeptide repeat
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