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AgaP_AGAP010559 AGAP010559-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1275295, updated on 20-Sep-2020

Summary

Gene symbol
AgaP_AGAP010559
Gene description
AGAP010559-PA
Primary source
VectorBase:AGAP010559
Locus tag
AgaP_AGAP010559
Gene type
protein coding
RNA name
AGAP010559-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000013771; ENSANGG00000013771

Genomic context

See AgaP_AGAP010559 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
2
Sequence:
Chromosome: 3L; NT_078267.5 (6373291..6374918)

Chromosome 3L - NT_078267.5Genomic Context describing neighboring genes Neighboring gene AGAP010557-PA Neighboring gene AGAP010558-PA Neighboring gene AGAP010560-PA Neighboring gene AGAP010561-PA

Pathways from PubChem

General gene information

Homology

  • Homologs of the AgaP_AGAP010559 gene: The AgaP_AGAP010559 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
AGAP010559-PA
XP_314533.4
  • AGAP010559-PA encoded by AGAP010559-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078267.5 Reference assembly

    Range
    6373291..6374918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_314533.4XP_314533.4  AGAP010559-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_314533.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PPS5
    Conserved Domains (3) summary
    COG5151
    Location:8396
    SSL1; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]
    cl00057
    Location:66257
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl06838
    Location:289396
    C1_4; TFIIH C1-like domain
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