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LOC1271923 regulator of nonsense transcripts 2 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1271923, updated on 25-Jan-2024

Summary

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Gene symbol
LOC1271923
Gene description
regulator of nonsense transcripts 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (5935813..5940747)

Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5666743 Neighboring gene uncharacterized LOC133393537 Neighboring gene phosphomevalonate kinase Neighboring gene E3 ubiquitin-protein ligase Hakai

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of exon-exon junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of nonsense transcripts 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    5935813..5940747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061648741.1 → XP_061504725.1  regulator of nonsense transcripts 2

Nucleotide Protein Strain
Heading Accession and Version

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