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AgaP_AGAP011340 AGAP011340-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1270599, updated on 20-Sep-2020

Summary

Gene symbol
AgaP_AGAP011340
Gene description
AGAP011340-PA
Primary source
VectorBase:AGAP011340
Locus tag
AgaP_AGAP011340
Gene type
protein coding
RNA name
AGAP011340-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000015972; ENSANGG00000015972

Genomic context

See AgaP_AGAP011340 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
6
Sequence:
Chromosome: 3L; NT_078267.5 (21445777..21450792)

Chromosome 3L - NT_078267.5Genomic Context describing neighboring genes Neighboring gene AGAP011338-PA Neighboring gene AGAP011339-PA Neighboring gene AGAP011341-PA Neighboring gene AGAP011342-PA

Pathways from PubChem

General gene information

Homology

  • Homologs of the AgaP_AGAP011340 gene: The AgaP_AGAP011340 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, zebrafish, fruit fly, mosquito, C.elegans, A.thaliana, rice, and frog.

General protein information

Preferred Names
AGAP011340-PA
XP_309311.4
  • AGAP011340-PA encoded by AGAP011340-RA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078267.5 Reference assembly

    Range
    21445777..21450792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_309311.4XP_309311.4  AGAP011340-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_309311.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7QHS8
    Conserved Domains (3) summary
    COG5161
    Location:11428
    SFT1; Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]
    pfam03178
    Location:10641400
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:101646
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term
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