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MAB21L3 mab-21 like 3 [ Homo sapiens (human) ]

Gene ID: 126868, updated on 25-Aug-2020

Summary

Official Symbol
MAB21L3provided by HGNC
Official Full Name
mab-21 like 3provided by HGNC
Primary source
HGNC:HGNC:26787
See related
Ensembl:ENSG00000173212
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf161
Expression
Biased expression in esophagus (RPKM 2.5), skin (RPKM 1.9) and 7 other tissues See more
Orthologs

Genomic context

See MAB21L3 in Genome Data Viewer
Location:
1p13.1
Exon count:
9
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (116111399..116138149)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (116654376..116677861)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928977 Neighboring gene long intergenic non-protein coding RNA 1649 Neighboring gene solute carrier family 22 member 15 Neighboring gene uncharacterized LOC105378918 Neighboring gene long intergenic non-protein coding RNA 1779 Neighboring gene uncharacterized LOC105378919

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ38716

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_152367.3NP_689580.2  protein mab-21-like 3

    See identical proteins and their annotated locations for NP_689580.2

    Status: VALIDATED

    Source sequence(s)
    AK096035, AL121982
    Consensus CDS
    CCDS886.1
    UniProtKB/Swiss-Prot
    Q8N8X9
    Conserved Domains (1) summary
    pfam03281
    Location:58351
    Mab-21; Mab-21 protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    116111399..116138149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011540625.2XP_011538927.1  protein mab-21-like 3 isoform X1

    See identical proteins and their annotated locations for XP_011538927.1

    UniProtKB/Swiss-Prot
    Q8N8X9
    Conserved Domains (1) summary
    pfam03281
    Location:58351
    Mab-21; Mab-21 protein
  2. XM_011540626.2XP_011538928.1  protein mab-21-like 3 isoform X1

    See identical proteins and their annotated locations for XP_011538928.1

    UniProtKB/Swiss-Prot
    Q8N8X9
    Related
    ENSP00000358512.3, ENST00000369500.3
    Conserved Domains (1) summary
    pfam03281
    Location:58351
    Mab-21; Mab-21 protein
  3. XM_011540623.2XP_011538925.1  protein mab-21-like 3 isoform X1

    See identical proteins and their annotated locations for XP_011538925.1

    UniProtKB/Swiss-Prot
    Q8N8X9
    Conserved Domains (1) summary
    pfam03281
    Location:58351
    Mab-21; Mab-21 protein
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