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IRGQ immunity related GTPase Q [ Homo sapiens (human) ]

Gene ID: 126298, updated on 12-Oct-2019

Summary

Official Symbol
IRGQprovided by HGNC
Official Full Name
immunity related GTPase Qprovided by HGNC
Primary source
HGNC:HGNC:24868
See related
Ensembl:ENSG00000167378
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IRGQ1; FKSG27
Expression
Ubiquitous expression in brain (RPKM 3.6), bone marrow (RPKM 3.5) and 25 other tissues See more
Orthologs

Genomic context

See IRGQ in Genome Data Viewer
Location:
19q13.31
Exon count:
3
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (43584367..43596234, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (44088519..44100287, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 575 Neighboring gene X-ray repair cross complementing 1 Neighboring gene phospholipase A2 inhibitor and LY6/PLAUR domain containing Neighboring gene zinc finger protein 576 Neighboring gene zinc finger protein 428 Neighboring gene serine/arginine repetitive matrix 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ12521, FLJ38849, FLJ42796, FLJ46713

Gene Ontology Provided by GOA

Function Evidence Code Pubs
GTP binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
immunity-related GTPase family Q protein
Names
immunity-related GTPase family, Q
immunity-related GTPase family, Q1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_055008.1 RefSeqGene

    Range
    5100..16868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001007561.2NP_001007562.1  immunity-related GTPase family Q protein

    See identical proteins and their annotated locations for NP_001007562.1

    Status: VALIDATED

    Source sequence(s)
    AC006276, BC137020, BM669904, CN315405
    Consensus CDS
    CCDS33040.1
    UniProtKB/Swiss-Prot
    Q8WZA9
    Related
    ENSP00000387535.1, ENST00000422989.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    43584367..43596234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005258515.3XP_005258572.1  immunity-related GTPase family Q protein isoform X1

    See identical proteins and their annotated locations for XP_005258572.1

    UniProtKB/Swiss-Prot
    Q8WZA9
    Related
    ENSP00000472250.1, ENST00000602269.1
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