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CCDC159 coiled-coil domain containing 159 [ Homo sapiens (human) ]

Gene ID: 126075, updated on 1-Jun-2020

Summary

Official Symbol
CCDC159provided by HGNC
Official Full Name
coiled-coil domain containing 159provided by HGNC
Primary source
HGNC:HGNC:26996
See related
Ensembl:ENSG00000183401
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 10.3), prostate (RPKM 10.0) and 25 other tissues See more
Orthologs

Genomic context

See CCDC159 in Genome Data Viewer
Location:
19p13.2
Exon count:
13
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (11346483..11354951)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (11457160..11465620)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene tetraspanin 16 Neighboring gene RAB3D, member RAS oncogene family Neighboring gene transmembrane protein 205 Neighboring gene phospholipid phosphatase related 2 Neighboring gene SWIM-type zinc finger 7 associated protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ45351, FLJ79238

General protein information

Preferred Names
coiled-coil domain-containing protein 159

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080503.3NP_001073972.2  coiled-coil domain-containing protein 159

    Status: VALIDATED

    Source sequence(s)
    CA848583, CB241007, DC416232
    Consensus CDS
    CCDS45976.1
    UniProtKB/Swiss-Prot
    P0C7I6
    Related
    ENSP00000402239.1, ENST00000458408.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    11346483..11354951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017026260.2XP_016881749.1  coiled-coil domain-containing protein 159 isoform X8

  2. XM_017026259.2XP_016881748.1  coiled-coil domain-containing protein 159 isoform X7

  3. XM_024451347.1XP_024307115.1  coiled-coil domain-containing protein 159 isoform X9

  4. XM_017026258.2XP_016881747.1  coiled-coil domain-containing protein 159 isoform X5

  5. XM_011527678.3XP_011525980.2  coiled-coil domain-containing protein 159 isoform X6

  6. XM_017026264.2XP_016881753.1  coiled-coil domain-containing protein 159 isoform X11

  7. XM_017026261.2XP_016881750.1  coiled-coil domain-containing protein 159 isoform X10

  8. XM_017026263.2XP_016881752.1  coiled-coil domain-containing protein 159 isoform X10

  9. XM_017026256.2XP_016881745.1  coiled-coil domain-containing protein 159 isoform X2

  10. XM_017026262.2XP_016881751.1  coiled-coil domain-containing protein 159 isoform X10

  11. XM_017026255.1XP_016881744.1  coiled-coil domain-containing protein 159 isoform X1

  12. XM_006722643.1XP_006722706.1  coiled-coil domain-containing protein 159 isoform X3

    Conserved Domains (1) summary
    TIGR00618
    Location:35224
    sbcc; exonuclease SbcC
  13. XM_017026257.1XP_016881746.1  coiled-coil domain-containing protein 159 isoform X4

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