U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rhaR positive regulator for rhaRS operon [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1255576, updated on 4-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
rhaR
Gene description
positive regulator for rhaRS operon
Locus tag
STM4049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_003197.2 (4260056..4260915)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene L-rhamnose isomerase Neighboring gene rhamnulokinase Neighboring gene positive regulator for rhaBAD operon Neighboring gene DMT Superfamily L-rhamnose:H+ symporter protein Neighboring gene putative outer membrane protein Neighboring gene putative C4-dicarboxylate transport system Neighboring gene putative C4-dicarboxylate transport system

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

regulatory

  • Loc: 4260056-4260061 regulatory_class = ribosome_binding_site

General protein information

Go to the top of the page Help
Preferred Names
positive regulator for rhaRS operon
NP_462930.1
  • AraC/XylS family; L-rhamnose operon transcriptional activator RHAR. (SW:RHAR_SALTY)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    4260056..4260915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_462930.1 positive regulator for rhaRS operon [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_462930.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3U5YL60, A0A5U1NA36, A0A5Z5IF22, A0A624BY73, A0A627NLM0, A0A708BLU4, A0A725AGG9, A0A736JM94, A0A739DTL7, A0A739PNS6, A0A744A4R4, A0A750QFD0, A0A764M828
    Conserved Domains (1) summary
    PRK13502
    Location:1 → 282
    PRK13502; HTH-type transcriptional activator RhaR
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40865.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases