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idi isopentenyldiphosphate isomerase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1254562, updated on 4-Apr-2024

Summary

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Gene symbol
idi
Gene description
isopentenyldiphosphate isomerase
Locus tag
STM3039
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (3198593..3199149)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative metalloendopeptidase Neighboring gene tRNA-Gly Neighboring gene constitutive lysine tRNA synthetase Neighboring gene peptide chain release factor RF-2 Neighboring gene ssDNA exonuclease Neighboring gene protein disulfide isomerase II

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: 3198593-3198598 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
isopentenyldiphosphate isomerase
NP_461955.1
  • similar to E. coli putative enzyme (AAC75927.1); Blastp hit to AAC75927.1 (182 aa), 70% identity in aa 1 - 180

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    3198593..3199149
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_461955.1 isopentenyldiphosphate isomerase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_461955.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5T3VUX2, A0A5T8UG69, A0A5U2F141, A0A5Y3I8E6, A0A659RZM9, A0A6V9XRA7, A0A735MW98, A0A736HGA8, A0A742UGQ5, A0A749PG87, A0A764N2R5, A0A7D8EQ03
    Conserved Domains (1) summary
    PRK03759
    Location:1 → 181
    PRK03759; isopentenyl-diphosphate Delta-isomerase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8ZM82.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases