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pduA propanediol utilization protein [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253559, updated on 27-Aug-2024

Summary

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Gene symbol
pduA
Gene description
propanediol utilization protein
Locus tag
STM2038
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Sequence:
NC_003197.2 (2116837..2117127)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene propanediol utilization protein Neighboring gene propanediol utilization protein Neighboring gene propanediol utilization protein Neighboring gene propanediol utilization dehydratase, large subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Alanine scanning mutagenesis identifies an asparagine-arginine-lysine triad essential to assembly of the shell of the Pdu microcompartment. Sinha S, et al. J Mol Biol, 2014 Jun 12. PMID 24747050, Free PMC Article
  2. Deletions of ttrA and pduA genes in Salmonella enterica affect survival within chicken-derived HD-11 macrophages. Saraiva MMS, et al. Curr Genet, 2024 Aug 16. PMID 39150461
  3. Salmonella enterica serovars in absence of ttrA and pduA genes enhance the cell immune response during chick infections. Cabrera JM, et al. Sci Rep, 2023 Jan 11. PMID 36631563, Free PMC Article
  4. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Deletions of ttrA and pduA genes in Salmonella enterica affect survival within chicken-derived HD-11 macrophages.
    Title: Deletions of ttrA and pduA genes in Salmonella enterica affect survival within chicken-derived HD-11 macrophages.
  2. Salmonella enterica serovars in absence of ttrA and pduA genes enhance the cell immune response during chick infections.
    Title: Salmonella enterica serovars in absence of ttrA and pduA genes enhance the cell immune response during chick infections.
  3. Biochemical, genetic, and structural analysis of 20 mutants of PduA allowed us the authors determine that PduA K26, N29, and R79 are crucial residues that stabilize the shell of the 1,2-propanediol bacterial microcompartments.
    Title: Alanine scanning mutagenesis identifies an asparagine-arginine-lysine triad essential to assembly of the shell of the Pdu microcompartment.
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General gene information

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regulatory

  • Loc: 2116837-2116842 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
propanediol utilization protein
NP_460983.1
  • polyhedral bodies; propanediol utilization protein PDUA. (SW:PDUA_SALTY)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    2116837..2117127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_460983.1 propanediol utilization protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_460983.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3R1B1E3, A0A3V9LB78, A0A5Y2YFE3, A0A5Y3I9B3, A0A6X8N641, A0A747U3A7, A0A756AZL5
    Conserved Domains (1) summary
    COG4577
    Location:3 → 94
    CcmK; Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN [Secondary metabolites biosynthesis, transport and catabolism, Energy production and conversion]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0A1C7.1

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