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yedO putative 1-cyclopropane-carboxylate deaminase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1253474, updated on 6-Oct-2023
Gene symbol
yedO
Gene description
putative 1-cyclopropane-carboxylate deaminase
Locus tag
STM1953
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Sequence:
NC_003197.2 (2042047..2043044, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene transcriptional regulator of ftsQAZ gene cluster Neighboring gene putative ABC-type polar amino acid transport system Neighboring gene putative ABC-type amino acid transporter Neighboring gene putative periplasmic binding transport protein Neighboring gene putative regulator of FliA

Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

regulatory

  • Loc: c2043044-2043039 regulatory_class = ribosome_binding_site
Preferred Names
putative 1-cyclopropane-carboxylate deaminase
NP_460906.1
  • similar to E. coli putative 1-aminocyclopropane-1-carboxylate deaminase (AAC74986.1); Blastp hit to AAC74986.1 (360 aa), 90% identity in aa 33 - 360

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    2042047..2043044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_460906.1 putative 1-cyclopropane-carboxylate deaminase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_460906.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5W2CJ61, A0A745E153, A0A752PKM8, A0A763QML8
    Conserved Domains (1) summary
    PRK03910
    Location:4 → 328
    PRK03910; D-cysteine desulfhydrase; Validated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8ZNT7.3

Gene LinkOut

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