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Depp1 DEPP autophagy regulator 1 [ Sciurus carolinensis (gray squirrel) ]

Gene ID: 124984575, updated on 3-Dec-2024
Gene symbol
Depp1
Gene description
DEPP autophagy regulator 1
See related
EnsemblRapid:ENSSCRG00010002191
Gene type
protein coding
RefSeq status
MODEL
Organism
Sciurus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus
Orthologs
all
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See Depp1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mSciCar1.2 (GCF_902686445.1) 5 NC_062217.1 (92577544..92580328, complement)

Chromosome 5 - NC_062217.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124984577 Neighboring gene transmembrane protein 72 Neighboring gene Ras association domain family member 4 Neighboring gene zinc finger protein 22 Neighboring gene olfactory receptor 49-like

Genomic Sequence:
NC_062217.1 Chromosome 5 Reference mSciCar1.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein DEPP1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_902686445.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSciCar1.2

Genomic

  1. NC_062217.1 Reference mSciCar1.2

    Range
    92577544..92580328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047552366.1 → XP_047408322.1  protein DEPP1

    UniProtKB/TrEMBL
    A0AA41T7M1
    Related
    ENSSCRP00010002480.1, ENSSCRT00010002784.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases