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LOC124909494 leucine-rich repeat extensin-like protein 5 [ Homo sapiens (human) ]

Gene ID: 124909494, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124909494
Gene description
leucine-rich repeat extensin-like protein 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
all
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Genomic context

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See LOC124909494 in Genome Data Viewer
Location:
3q24
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (147362666..147370456, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268449 Neighboring gene ribosomal protein L21 pseudogene 71 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:147034641-147035142 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:147035143-147035642 Neighboring gene VISTA enhancer hs213 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:147059254-147059998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:147077316-147077902 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:147094929-147095809 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:147108264-147108780 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:147108781-147109295 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:147111165-147111666 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:147113516-147114253 Neighboring gene ZIC4 antisense RNA 1 Neighboring gene VISTA enhancer hs1043 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:147126759-147127339 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr3:147129965-147130804 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:147130805-147131644 Neighboring gene Zic family member 4 Neighboring gene Zic family member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000003.12 Chromosome 3 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Homology

General protein information

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Preferred Names
leucine-rich repeat extensin-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    147362666..147370456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047449442.1 → XP_047305398.1  leucine-rich repeat extensin-like protein 5

Nucleotide Protein
Heading Accession and Version

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